Teaching
Interests
-
General Chemistry
-
Physical Chemistry
- Quantitative Analysis
-
Inorganic Chemistry
- Bioorganic Chemistry
Course taught
-
General chemistry: Chem
103
-
Mathematics in chemistry
and biology: Maths 497
-
Quantitative analysis: Chem 213
Research
Interests
Computational
Chemistry and Biochemistry
Computational
modeling enzymatic processes. How enzymes accomplish precision
in substrate recognition? How a mutation far away from the active site
can have an important effect in enzyme catalysis? How significant
are the quantum mechanical effects in enzymatic processes such as catalysis,
binding, and redox transitions? I am interested in these questions
and my research is focused on to the study of kinetic and thermodynamic
properties of enzymes using computational methods. In these studies, quantum
chemical calculations are carried out on a smaller part of molecules/analogs
using higher level electronic energy calculations. These studies are then
combined with hybrid quantum mechanical/molecular mechanical based biomolecular
simulations to understand the role of protein environments on functional
properties such as catalysis, substrate binding, and redox behaviors.
Research
with Undergraduate Students
Redox processes in enzymes. Recently,
undergraduates Mr. James Rauschnot, Ms. Chee Yang, and Mr. Vang Yang have
explored the redox behavior of a quinone reductase
that
activates an anti-cancer
drug. We measured the redox potentials of the enzyme using theory
and explored the effect of charged residues in the redox process. The resulted
work has been published in Journal of Physical
Chemistry.
Communicating pathway in enzymes
(jointly
being inverstigated with Dr.
Sanchita Hati). In collaboration with undergraduates (Ms. Kristina
Weimer, Ms. Brianne Shane, and Mr. Michael Brunetto) we have studied the
role of co-evolved residues on protein domain dynamics. Initial results
of this work has been published in Journal
of Biological Chemistry.
Enzyme motion induced by redox changes.
In
collaboration with Ms. Chee Yang, Mr. James Rauschnot, and Mr. Alex Greene
we are studying the effect of redox changes on protein motion.